Phospho-seq
Phospho-seq
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Protocols
Analyzing Phospho-seq Data with Signac and Seurat
A basic guide to processing Phospho-seq data with Signac and Seurat, including useful visualizations.
Last updated on Oct 24, 2025
R Script
Related Reference - Signac
Signac
Seurat
Antibody Conjugation
A guide to conjugating antibodies with TCO-labeled oligos, as provided in the Phospho-seq kit.
Last updated on Oct 24, 2025
PDF
Original Reference
Protocol with Oligo Labeling
FlexPlex
A guide to running FlexPlex, which quantifies protein, guides, oligohashes and RNA using the 10x Flex kit.
Last updated on Oct 24, 2025
PDF
Related Reference
ADT, OligoHash and Guide Quantification Script
Phospho-seq with 10X ATAC-seq kit
A guide to running Phospho-seq with the 10x scATAC kit.
admin
Last updated on Oct 24, 2025
PDF
Related Reference
Phospho-seq with the 10x Multiome Kit
A guide for running Phospho-seq using the 10x Multiome kit to capture RNA in addition to ATAC and Protein.
Last updated on Oct 24, 2025
PDF
Related Reference
Preparing Antibodies for Conjugation
A quick protocol to clean up antibodies with Promega Magne Beads to prepare them for conjugation with the Phospho-seq kit.
Last updated on Oct 24, 2025
PDF
Antibody Purification Beads
Tools
Helpful tools for designing Phospho-seq and FlexPlex experiments
Last updated on Aug 13, 2025
10x Flex Custom RNA Probe Maker
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